Latest updates for Scrna-Seq

Fresh curated links around scRNA-seq are collected here so marketers can spot useful updates and turn timely ideas into posts faster.

Recent items include:

  • Single-cell and single-embryo RNA sequencing
  • Free scRNA-seq Data Analysis Workshop
  • Seq-Scope-X pushes spatial transcriptomics beyond optical resolution

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Fresh articles and ideas

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rna-seqblog.com /5 days ago

Single-cell and single-embryo RNA sequencing

Single-cell and single-embryo RNA sequencing enables detailed analysis of gene expression and cell identity during the earliest stages of embryonic development...

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rna-seqblog.com /2 weeks ago

Free scRNA-seq Data Analysis Workshop

This hands-on course teaches RNA sequencing analysis for single cells, covering quality control, normalization, clustering, annotation, dimensionality reduction, and differential g...

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rna-seqblog.com /1 month ago

Seq-Scope-X pushes spatial transcriptomics beyond optical resolution

RNA sequencing combined with tissue expansion enabled ultra-high-resolution spatial transcriptomics, allowing researchers to map gene activity within individual cells with...

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rna-seqblog.com /2 weeks ago

Machine learning approaches for biomarker discovery using single-cell RNA sequencing

RNA sequencing combined with machine learning can identify complex gene-expression patterns and potential biomarkers hidden within diverse populations of individual cells...

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rna-seqblog.com /1 week ago

scLS – a computationally efficient differentially expressed gene detection algorithm

A new RNA sequencing analysis method uses the Lomb-Scargle periodogram to efficiently identify genes associated with pseudotime across complex single-cell trajectories...

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rna-seqblog.com /1 month ago

scImmuneCo – a compendium of cell-type-specific functional modules for decoding immune responses from single-cell RNA-se...

Single-cell RNA sequencing powers scImmuneCo, revealing cell-specific gene networks that improve our understanding of immune responses, aging, and disease...

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journals.plos.org /4 weeks ago

SKIM: A fast sketching strategy integrated with model’s dynamic-feedback for large-scale single-cell transcriptomic anal...

by Jiaxing Bai, Feng Zhou, Chongyang Tan, Yichun Gao, Yushuang He, Xiaobing Huang, Ying Wang The rapid expansion of single-cell RNA sequencing (scRNA-seq) datasets poses analytica...

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bioengineer.org /4 weeks ago

OneCell CUT&Tag Maps Chromatin, Transcripts and Surface Markers, Revealing Epigenomic Reprogramming

A new single-cell technology is giving researchers an unusually complete view of how individual cells establish and change their identities. Called OneCell CUT&Tag, the method...

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rna-seqblog.com /1 month ago

scCap – annotation-free phenotype prediction using knowledge-augmented clustering from single-cell RNA sequencing data

RNA sequencing combined with annotation-free artificial intelligence improved phenotype prediction by identifying disease-associated cell populations without relying on predefined....

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journals.plos.org /1 day ago

scGSI: Graph-guided self-supervised integration of paired single-cell multi-omics

by Xiang Chen, Zihan Yang, Xiaoyu Liu, Zhiyi Xie, Wenlu Guo Paired single-cell multi-omics technologies provide direct within-cell correspondence across molecular layers and offer...

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rna-seqblog.com /1 month ago

Benchmarking long-read RNA sequencing tools for single-cell and spatial transcriptomics

RNA sequencing benchmark compares long-read bioinformatics tools for single-cell and spatial transcriptomics, helping researchers improve isoform detection and gene...

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rna-seqblog.com /1 week ago

CellTypeAI – cell annotation for scRNA-seq using local generative-AI

CellTypeAI combines local generative AI with biological context to improve cell annotation accuracy in single-cell RNA sequencing while helping researchers keep sensitive data priv...

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rna-seqblog.com /1 month ago

Rectangle – robust and scalable multiscale deconvolution informed by single-cell RNA sequencing data

Rectangle combines bulk and single-cell RNA sequencing to accurately identify cell types and cell states, making large transcriptomic studies more informative and scalable...

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journals.plos.org /1 month ago

ScanNet: Single-cell annotation informed by transcriptional regulation Network via iterative heterogeneous graph learnin...

by Yongyu Long, Wenhao Zhang, Lan Cao, Xiaobing Huang, Ying Wang Accurate annotation of cell types in single-cell transcriptome sequencing (scRNA-seq) data is critical for underst...

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rna-seqblog.com /5 days ago

New method allows scientists to follow gene activity over time in the same cells

Live-cell RNA sequencing uses engineered virus-like particles to repeatedly sample transcriptomes without destroying cells, enabling researchers to track gene expression changes ov...

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rna-seqblog.com /1 month ago

DeepDETAILS – high-resolution reconstruction of cell-type-specific transcriptional regulatory processes from bulk sequen...

DeepDETAILS combines artificial intelligence with RNA sequencing and chromatin data to reconstruct cell-specific gene regulation from bulk tissue sequencing experiments...

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nanowerk.com /1 week ago

A Google-like search engine for single-cell RNA

Scientists have built a search engine that can scan data from millions of single cells from thousands of experiments worldwide in seconds. The tool makes it possible to answer prev...

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rna-seqblog.com /1 month ago

Comparative study of single-cell and bulk RNA sequencing data from metastatic bone marrow neuroblastoma samples

RNA sequencing reveals how neuroblastoma reshapes the bone marrow environment, identifying immune interactions and new tumor-specific targets that may improve...

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rna-seqblog.com /1 month ago

Novogene Europe Expands Single-cell Sequencing Capability at Cambridge Omics Centre

Expanded RNA sequencing services at Novogene Europe bring advanced single-cell transcriptomics, bioinformatics, and multiomics support closer to UK researchers studying complex bio...

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rna-seqblog.com /1 week ago

SPIDER improves spatial transcriptomics data using single-cell RNA sequencing

SPIDER uses single-cell RNA sequencing references to reduce noise in spatial transcriptomics, improving gene expression patterns, tissue structure identification...

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rna-seqblog.com /1 month ago

Spatial transcriptomics benchmark compares leading platforms

RNA sequencing and spatial transcriptomics were combined to benchmark leading platforms, helping researchers compare how accurately each maps gene activity within complex tissues.....

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journals.plos.org /4 weeks ago

RareCapsNet: An explainable capsule network enables robust discovery of rare cell populations from large-scale single-ce...

by Sumanta Ray, Snehalika Lall Large-scale single-cell RNA sequencing has created new opportunities for computational identification of rare cell populations from complex transcri...

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rna-seqblog.com /1 week ago

ARCADIA combines RNA sequencing and spatial proteomics to reveal how tissue location shapes cell behavior

ARCADIA integrates single-cell RNA sequencing with spatial proteomics to reveal how tissue neighborhoods influence B-cell maturation, T-cell activation, and other transcriptional p...

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rna-seqblog.com /1 month ago

NanoncRNA-seq – an rRNA-depleted full-length transcriptome strategy for identification of novel lncRNA isoforms

A new RNA sequencing workflow using nanopore technology improves full-length lncRNA isoform discovery, revealing many previously undetected transcripts missed by conventional short...

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Sources covering Scrna-Seq

bioengineer.org

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journals.plos.org

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nanowerk.com

Recent coverage from public sources
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rna-seqblog.com

Recent coverage from public sources
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