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rna-seqblog.com /1 day ago

STGBench – sequencing-level spatial DNA-RNA simulation for multimodal and virtual cell-oriented benchmarking of genomic...

STGBench generates realistic paired DNA and RNA sequencing datasets with known genetic alterations, enabling accurate benchmarking of spatial genomics and transcriptomics analysis....

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journals.plos.org /3 weeks ago

GrassSV – hybrid method to detect structural variants in high throughput DNA-seq data

by Dominik Witczak, Krzysztof Sychla, Julia Wysocka, Artur Laskowski, Wojciech Frohmberg, Marta Glowacka, Alicja Dzik, Piotr Lukasiak, Jacek Blazewicz, Aleksandra Swiercz Genetic...

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rna-seqblog.com /1 month ago

miND standardizes small RNA sequencing analysis for biomarker discovery

RNA sequencing with the miND pipeline supports standardized small RNA analysis for biomarker discovery across tissues, plasma, extracellular vesicles, and other sample types...

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rna-seqblog.com /2 days ago

NanoncRNA-seq – an rRNA-depleted full-length transcriptome strategy for identification of novel lncRNA isoforms

A new RNA sequencing workflow using nanopore technology improves full-length lncRNA isoform discovery, revealing many previously undetected transcripts missed by conventional short...

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rna-seqblog.com /1 month ago

NBSR – a Negative Binomial Softmax Regression model for microRNA-seq data analysis

A new statistical framework improves microRNA sequencing analysis by increasing sensitivity, reducing false discoveries, and providing more accurate detection of differential micro...

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bioengineer.org /1 month ago

New Test Offers Comprehensive DNA Analysis for Rare Genetic Disorders

A groundbreaking advancement in the diagnosis of rare genetic disorders has emerged from the collaborative efforts of researchers at Radboud University Medical Center and Maastrich...

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rna-seqblog.com /2 weeks ago

Combining AI and RNA analysis improves detection of disease-causing splicing variants

Combining computational tools with functional RNA sequencing improves interpretation of disease-causing splicing variants and highlights the importance of transcript-level validati...

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rna-seqblog.com /1 month ago

Improving gene expression analysis with APA-seq data

A new APA-seq analysis method improves differential gene expression detection, helping researchers gain deeper insights from RNA sequencing data and alternative polyadenylation stu...

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rna-seqblog.com /3 weeks ago

Alithea Genomics launches early access program for MERCURIUSâ„¢ 1536 DRUG-seq, bringing transcriptomics to compound scre...

MERCURIUSâ„¢ 1536 DRUG-seq brings RNA sequencing to large-scale compound screening, enabling efficient gene expression profiling... The post Alithea Genomics launches early access...

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rna-seqblog.com /2 weeks ago

Whole RNA sequencing improves gene fusion detection in acute leukemia

RNA sequencing enabled comprehensive detection of clinically relevant gene fusions in acute leukemia, including rare rearrangements that conventional diagnostic methods failed to i...

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rna-seqblog.com /2 weeks ago

RNA-Seq in Patient Care: From Sample Collection to Clinical Interpretation

RNA sequencing supports clinical decision making when specimen quality, analysis, and interpretation remain aligned from sample collection through patient-focused reporting... The...

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rna-seqblog.com /2 weeks ago

Validating RNA sequencing for reliable detection of plant viruses and viroids

A validated RNA sequencing workflow demonstrates reliable detection of plant viruses and viroids, supporting accurate, comprehensive diagnostics for symptomatic crop samples... The...

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rna-seqblog.com /3 weeks ago

EclipseBio expands eCOMPASSâ„¢ platform with eSENSE Breakâ„¢ to map RNA fragmentation at nucleotide resolution

Eclipse Bioinnovations uses RNA sequencing in eSENSE Breakâ„¢ to map RNA fragmentation at single-nucleotide resolution, helping developers understand RNA stability and structural v...

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rna-seqblog.com /3 weeks ago

New method reconstructs cell evolution from single-cell RNA sequencing data

RNA sequencing data analyzed with SCITE-RNA enabled reconstruction of cell lineage trees and linked cancer cell evolution to gene expression profiles... The post New method reconst...

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rna-seqblog.com /1 month ago

Transcriptomics in space, an RNA sequencing pipeline for space biology research

RNA sequencing supports space biology research by enabling transcriptome-wide analysis of gene expression changes associated with spaceflight and adaptation to space environments.....

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habr.com /1 week ago

Полный геном за $200 и его анализ в домашних условиях: Just-DNA-Lite, ИИ и пересборка генома. Часть 3

В прошлой части я рассказывал о файлах и их форматах, которые я получил после полногеномного секвенирования.В этой статье поговорим о трактовке результатов секвенирования с помощью...

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rna-seqblog.com /2 weeks ago

Roche announces the launch of AXELIOS 1, a transformative next-generation sequencing platform

RNA sequencing capabilities are expanding with Roche's AXELIOS 1 platform, offering faster, scalable sequencing to support genomics research, single-cell studies, and future clinic...

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genengnews.com /1 month ago

Illumina Announces MRD Kit Ahead of ASCO Meeting

Ahead of ASCO 2026, Illumina unveiled an early-access MRD research kit using whole-genome sequencing and DRAGEN analysis, enabling highly sensitive cancer monitoring workflows on N...

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rna-seqblog.com /2 weeks ago

Partnership with Oxford Nanopore Technologies will support development of RNA liquid biopsy for cancer early detection

RNA sequencing and nanopore sequencing enabled Eclipse-like full transcriptome analysis to identify novel non-coding RNA biomarkers in extracellular vesicles for early esophageal.....

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genengnews.com /1 month ago

HELIX AI Model Accurately Predicts RNA Splicing, Unlocks Precision Medicine

A new AI-driven framework enables highly accurate prediction of RNA splicing and isoform usage for applications across splicing pathogenic variant interpretation and precision medi...

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rna-seqblog.com /3 days ago

Amaranth – enhanced single-cell transcript assembly via discriminative modelling of UMI reads and internal reads

Amaranth improves transcript reconstruction from RNA sequencing data by modeling different read types, enabling more accurate isoform analysis at single-cell resolution...

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rna-seqblog.com /1 week ago

New England Biolabs® launches the NEBNext® Companion Module for Oxford Nanopore Technologies® Direct RNA Sequencing

New England Biolabs introduces a new RNA sequencing companion module that simplifies direct native RNA sequencing with Oxford Nanopore for transcriptomics and RNA...

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rna-seqblog.com /1 week ago

Single nucleus RNA sequencing identifies new treatment targets for rare sinonasal cancers

RNA sequencing reveals distinct cellular programs and therapeutic targets in rare sinonasal carcinomas, supporting precision oncology approaches tailored to specific tumor subtypes...

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rna-seqblog.com /2 weeks ago

Nanopore direct RNA sequencing expands the view of the transcriptome

RNA sequencing using nanopore direct RNA sequencing enables simultaneous analysis of native RNA molecules, transcript isoforms, RNA modifications, and poly(A) tails for comprehensi...

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