Social Media Ideas for Gene Regulatory Networks

Latest updates for Gene Regulatory Networks

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rna-seqblog.com /2 weeks ago

GP-DHT uses single-cell RNA sequencing to map gene regulatory networks

Single-cell RNA sequencing combined with GP-DHT helps predict transcription factor and target gene relationships, providing a...

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journals.plos.org /1 month ago

Post-transcriptional regulation of Profilin-2 by microRNAs and RNA-binding proteins forms a critical regulatory node for...

by Carolyn Sangokoya, Isabella R. Rosso, Rana Ghandehari-Alavijeh, Robert Blelloch Post-transcriptional control by RNA binding proteins (RBPs) and microRNAs play central roles in...

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journals.plos.org /2 weeks ago

CardamomOT: A mechanistic optimal transport-based framework for gene regulatory network inference, trajectory reconstruc...

by Yann Maugé, Elias Ventre A key challenge in inferring gene regulatory networks (GRNs) governing cellular processes such as differentiation and reprogramming from experimental d...

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journals.plos.org /1 month ago

Dynamic Landscape Analysis of cell fate decisions provides predictive models of neural development from single-cell data

by Marine Fontaine, M. Joaquina Delás, Meritxell Sáez, Rory J. Maizels, Elizabeth Finnie, James Briscoe, David A. Rand Building a mechanistic understanding of cell fate decisions...

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journals.plos.org /1 month ago

Regeneration programs buffer genetic defects in animal development

by Kazunori Ando, Sushant Bangru, John Welsby, John D. Thompson, Kenneth D. Poss Regeneration programs enable animals to restore damaged or lost tissues, and the range of stimuli...

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bioengineer.org /1 day ago

Regulatory Evolution Offers Clues to Horn Diversification in Beetles

A comparative study in two beetle species links evolving regulatory DNA and condition-specific chromatin changes to horn diversification, with functional evidence for two BMP-pathw...

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journals.plos.org /1 day ago

The role of gene regulatory evolution in weapon diversification: Insights from comparative genomics, chromatin profiling...

by Phillip L. Davidson, Isabel G. Manley, Armin P. Moczek Condition-responsive growth is a common feature of multicellular development, during which organisms integrate genetic an...

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journals.plos.org /2 weeks ago

HiFIseek: Gene-specific enrichment of high-impact mutations in associated genomic regions

by Rafael Riudavets Puig, Denise G. O’Mahony, Ina Skaara Brorson, Ksenia Sokolova, Vessela N. Kristensen, Anthony Mathelier Transcription is regulated through the sequence-specifi...

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journals.plos.org /2 weeks ago

Spatially resolved reaction–diffusion modeling reveals effects of intracellular spatial heterogeneity on yeast galactose...

by Tianyu Wu, Marie-Christin Spindler, Abner T. Apsley, Emmy Earnest, Zane R. Thornburg, Julia Mahamid, Zaida Luthey-Schulten Eukaryotic cells are spatially organized into functio...

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journals.plos.org /1 month ago

Regional signaling controls stem cell-mediated regeneration in an invertebrate chordate

by Tal Gordon, Tom Levy, Chester Jiamu Yu, Benyamin Rosental, Lauren Lubeck, Lucia Manni, Irving L. Weissman, Ayelet Voskoboynik Many tissues harbor quiescent stem cells that acti...

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nanowerk.com /3 weeks ago

A single temporary stimulus can redirect cell fate without permanent gene control

A new computational framework that identifies minimal temporary gene-control interventions to steer cells toward desired states while preserving cellular plasticity.

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journals.plos.org /1 week ago

Interpretable neural networks prioritize cancer driver genes from genome-wide dependency landscapes

by Qingyang Yin, Liang Chen Identifying cancer driver genes and their therapeutic impact remains a core challenge in computational cancer biology. We introduce xNNDriver and xAEDr...

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bioengineer.org /1 month ago

How CsgD Regulates Biofilm Formation and Quorum Sensing in Salmonella Typhimurium

A Master Switch in Salmonella May Link Sticky Biofilms to Bacterial “Social” Signals A gene regulator best known for helping Salmonella build its tough, adhesive biofilms may also...

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nanowerk.com /1 month ago

Researchers discover DNA organization is key to tissue regeneration

Researchers show that long-range chromatin loops help control tissue regeneration, revealing a direct role for 3D genome organization in regenerative processes.

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rna-seqblog.com /2 weeks ago

RNA-Seq reveals a new way the developing heart controls its growth

Single-cell RNA sequencing reveals how lymphatic-derived Reelin influences epicardial cells, fibroblasts and growth signaling involved in heart development and potentially cardiac...

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journals.plos.org /1 month ago

EFN-4/Ephrin converges with SAX-3/Robo, UNC-6/Netrin, and Heparan Sulfate Proteoglycan signaling to control MAB-5/Hox-de...

by Vedant D. Jain, Andrew M. Johannesen, Felipe L. Teixeira, Erik A. Lundquist Hox genes have been broadly implicated in nervous system development, but the molecular and genetic...

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