Latest updates for Cell Type Analysis

Fresh curated links around Cell Type Analysis are collected here so marketers can spot useful updates and turn timely ideas into posts faster.

Recent items include:

  • CellExLink: End-to-end cell-type recognition and normalization in biomedical text
  • CellTypeAI – cell annotation for scRNA-seq using local generative-AI
  • OneCell CUT&Tag Maps Chromatin, Transcripts and Surface Markers, Revealing Epigenomic Reprogramming

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journals.plos.org /1 month ago

CellExLink: End-to-end cell-type recognition and normalization in biomedical text

by Alimire Nabijiang, Leili Shahriyari Cell types are described in biomedical literature using diverse names, abbreviations, and phenotype phrases, which complicates their recogni...

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rna-seqblog.com /1 week ago

CellTypeAI – cell annotation for scRNA-seq using local generative-AI

CellTypeAI combines local generative AI with biological context to improve cell annotation accuracy in single-cell RNA sequencing while helping researchers keep sensitive data priv...

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bioengineer.org /4 weeks ago

OneCell CUT&Tag Maps Chromatin, Transcripts and Surface Markers, Revealing Epigenomic Reprogramming

A new single-cell technology is giving researchers an unusually complete view of how individual cells establish and change their identities. Called OneCell CUT&Tag, the method...

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journals.plos.org /4 weeks ago

Assessing the reliability of cellular decision making from noisy, multidimensional single-cell TNF–NF-κB signaling data

by Ali Emadi, Tomasz Lipniacki, Andre Levchenko, Ali Abdi Cells make hard calls under noise. When signaling is abnormal, those calls can go wrong and drive pathological conditions...

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genengnews.com /2 weeks ago

New Cytometry Technique for Characterizing Viral Vectors

Kite Pharma has developed a flow virometry technique to analyze single lentiviral particles, which they hope will improve product consistency by characterizing viral vector size an...

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genengnews.com /3 weeks ago

Cell Therapy Company Aims to Pioneer Analytics Automation

BlueRock says it’s helping advance the cell therapy industry by developing an automated system for analytical auditing. They say it’s among the few systems specifically designed fo...

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rna-seqblog.com /1 month ago

Rectangle – robust and scalable multiscale deconvolution informed by single-cell RNA sequencing data

Rectangle combines bulk and single-cell RNA sequencing to accurately identify cell types and cell states, making large transcriptomic studies more informative and scalable...

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genengnews.com /1 week ago

Advanced Imaging Technique Reveals Immune Cell Metabolic States in Blood Samples

Researchers showed how optical metabolic imaging (OMI) can be used to characterize metabolic activity within immune cells from the peripheral blood of patients, which could potenti...

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genengnews.com /3 weeks ago

Rare Immune Cell Type in Supercentenarians May Help Maintain Healthy Aging

Researchers studying immune cells in Japanese supercentenarians have found that normally rare, CD4 cytotoxic T lymphocytes become increasingly abundant with extreme age, and may he...

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journals.plos.org /1 month ago

ALFAssay: A feed‑forward neural network for quantitative fragmentomics‑based ctDNA profiling in breast cancer

by Alexandra Stanciu, Andrea Gombos, Elisa Agostinetto, Delphine Vincent, Laurence Buisseret, Andreas Papagiannis, Francoise Rothe, Nicola Occelli, Christos Sotiriou, David Venet,...

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journals.plos.org /1 month ago

Deep learning-supported image quantification of epithelial cell shapes and its application to polycystic kidney disease

by Johannes Jahn, Alexis Hofherr, Clara Consoli, Berenike Fajen, Rebekka Goll, Greta Theresa Liedtke, Adrian Boehm, Friederike Selbach, Paul Christoph Zeisler, Vanessa Weichselberg...

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genengnews.com /1 month ago

Cell-Therapy Manufacturers Get Creative on Checking Particulates

Manufacturers are developing innovative techniques to test for particulates in cell-containing products amid unclear regulatory guidance. Process simulation, minimizing particulate...

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rna-seqblog.com /1 month ago

scImmuneCo – a compendium of cell-type-specific functional modules for decoding immune responses from single-cell RNA-se...

Single-cell RNA sequencing powers scImmuneCo, revealing cell-specific gene networks that improve our understanding of immune responses, aging, and disease...

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rna-seqblog.com /1 month ago

Cell type signatures reveal shared features of Alzheimer’s disease across populations

RNA sequencing reveals cell-specific molecular signatures of Alzheimer's disease shared across diverse populations, providing new insights into disease mechanisms and potential the...

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bioengineer.org /1 week ago

Live Cell Shapes Reveal How Tissues Choose Their Final Identities

Cells do not become specialized in a single instant. During development, they gradually change their molecular programs, position, shape, polarity and behavior before reaching a ma...

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journals.plos.org /3 weeks ago

scKanFormer: A Transformer-KAN framework with biologically informed attention for cell type annotation in large-scale sc...

by Lin Yuan, Junjie Cao, Shengguo Sun, Siguo Wang, Lan Ye, De-Shuang Huang A key challenge in single-cell RNA sequencing (scRNA-seq) data analysis is accurately and efficiently id...

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rna-seqblog.com /1 month ago

DeepDETAILS – high-resolution reconstruction of cell-type-specific transcriptional regulatory processes from bulk sequen...

DeepDETAILS combines artificial intelligence with RNA sequencing and chromatin data to reconstruct cell-specific gene regulation from bulk tissue sequencing experiments...

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rna-seqblog.com /2 weeks ago

Free scRNA-seq Data Analysis Workshop

This hands-on course teaches RNA sequencing analysis for single cells, covering quality control, normalization, clustering, annotation, dimensionality reduction, and differential g...

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journals.plos.org

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rna-seqblog.com

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